Facing flak over his recent controversial order, Meghalaya High Court judge S R Sen on Friday issued a "clarification", saying neither was his judgment politically motivated nor did he say anything against secularism and that his order had been "misinterpreted".

In the 'clarification from the bench' posted on the high court website, Justice Sen said he does not belong to any political party and does not dream of getting a political berth after retirement. He said he had written the judgement based on truth, history and ground reality "to save the citizens of India, irrespective of caste, creed, religion or language".

The judge's observations in the December 10 judgement that India should have been a Hindu country after independence just as Pakistan became an Islamic country and that nobody should try to make India into an Islamic country had stoked a controversy.

The CPI(M) had urged Chief Justice of India Ranjan Gogoi to remove him from his judicial duties and had alleged that his utterances were against the basic structure of the Constitution.

Justice Sen, in the judgement passed on Monday while disposing of a petition of a man who was denied domicile certificate by Meghalaya, had also observed that he was confident that only this government under Narendra Modi will understand the gravity.

However, Justice Sen said on Friday that when he mentioned the government under Modi, it was inclusive of the ministers and members of both houses of Parliament and his request was to policymakers and lawmakers of the country. .

"Secondly, I would clarify here that in my judgement nowhere have I said anything against secularism and my judgement makes references to history and one cannot change the history," he said

He also asserted that "I am not a religious fanatic rather I respect all the religions because to me God is one".

In his order, Justice Sen had urged the Centre to bring a law to allow Hindus, Sikhs, Jains, Buddhist, Parsis, Christians and Khasis, Jaintias and Garos tribals who are presently residing in Bangladesh, Pakistan and Afghanistan to live in this country peacefully and with full dignity, without marking any cut-off year.

The judge in his clarification said such people were coming to India due to religious persecution and they may get a right to live in in India but the process for this had to be determined by the authorities and by due process of law.

"We should remember that whatever we call influx or foreigner, that is due to unwanted partition and without proper referendum and wrong boundary demarcation and mainly on religious persecution," Justice Sen said.

He added all states should embrace such people and no particular state or region should take the burden of influx. He added that it was only his suggestion and "totally depends upon the polity and lawmakers of the country.

At the same time he noted that the Constitution allows every citizen to settle in any part of the country.

"I do not belong to any political party nor have I got any dream to get any political berth after my retirement and neither is my judgment politically motivated or influenced by any party," said Justice Sen who is due to retire in March.

Although the Centre's Citizenship (Amendment) Bill, 2016 also seeks to make Hindus, Sikhs, Buddhists, Jains, Parsis and Christians from the three countries eligible for Indian citizenship after a stay of six years, there was no mention of the bill in the court order.

Noting that secularism is one of the basic structures of the Constitution, Justice Sen said, "It (India) should not further be divided on the basis of religion, caste, creed, community or language."

He had in his judgement said the National Register of Citizens exercise in Assam is "defective" as many foreigners "became Indians" due to the exercise and "original Indians are left out".

"Nobody should try to make India another Islamic country otherwise it will be a doomsday...," Justice Sen had said.

The judge was, however, quick to add in his order that he was not against "my Muslim brothers and sisters" who are residing in India for generations and abiding Indian laws.

"They should also be allowed to live peacefully".

AIMIM leader and MP Asaduddin Owaisi had reacted sharply to the court order. "This is a wrong judgment. We do not accept it. You cannot give such a judgement... India is and will remain a plural, secular country. What kind of judgement is this...will the government take note."

Union Minister Giriraj Singh, however, had welcomed the judge's order saying his observations are in line with public sentiments.